MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-456

Family name MIR-456 (all species)
Seed AGGCUGG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-456
Paralogues
Orthologues Aca-Mir-456  Ami-Mir-456  Cli-Mir-456  Cmi-Mir-456  Cpi-Mir-456  Dre-Mir-456  Ebu-Mir-456  Gga-Mir-456  Gja-Mir-456  Gmo-Mir-456  Lch-Mir-456  Loc-Mir-456  Mal-Mir-456  Mun-Mir-456  Pbv-Mir-456  Pma-Mir-456  Sto-Mir-456  Xla-Mir-456-P1  Xla-Mir-456-P2  Xtr-Mir-456 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)		 3: 79764295-79764355 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCUGUGUGUGUGUGUGUGGUGUGUGUGAGCAGGCAUCUUCUCAGCCUACAUGUGGAUUCCUAAAUCUGCAGGCUGGUUAGAUGGUUGUCAUGGCAUUCAUCUGAUAUCUACUGAAAUUC
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Structure
        10        20        30          40        50        60
GCUCUGUGUGUGUGUGUGU    U    GA--|   G     UC       A  UGUGGAU 
                   GGUG GUGU    GCAG CAUCU  UCAGCCU CA       U
                   CUAC UACG    UGUU GUAGA  GGUCGGA GU       C
CUUAAAGUCAUCUAUAGU-    U    GUAC^   G     UU       C  CUAAAUC 
 .       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-456_5p*
mirBase accessionMIMAT0026964
Sequence 
0- GCAGGCAUCUUCUCAGCCUACA -22
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Mature sequence

Tgu-Mir-456_3p
mirBase accessionMIMAT0014469
Sequence 
40- CAGGCUGGUUAGAUGGUUGUC -61
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