| MirGeneDB ID | Dno-Mir-1343 |
|---|
| Family name |
MIR-1343 (all species) |
|---|
| Seed |
UCCUAGG |
|---|
| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
|---|
| MiRBase ID |
dno-mir-1343
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-1343
Cfa-Mir-1343
Cja-Mir-1343
Cpo-Mir-1343
Eca-Mir-1343
Hsa-Mir-1343
Laf-Mir-1343
Ocu-Mir-1343
Pab-Mir-1343
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH578552: 1379019-1379078 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGCGGGGCAAUGAUGCUGGCGUCGGUGCUGGGGAGCGGCCCCCGGGGUGGCCCAUCGCUCCGGCCCCUCCUAGGGCCGGCACUCUUGCUGCGGGCCGGCUCCACGUCAGCCACCGACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAGCGGGGCAAUGAUG--- G GU U A - CC---| UGGCCCA
CUGGC UCG GC GGGG G CGGCCC GGGG U
GGCCG GGC CG UCUC C GCCGGG CCCC C
ACAGCCACCGACUGCACCUC - GU U A G AUCCU^ GGCCUCG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dno-Mir-1343_5p* (predicted) |
| mirBase accession | MIMAT0048047 |
|---|
| Sequence |
0- UGGGGAGCGGCCCCCGGGGUG -21
Get sequence
|
|---|
| Mature sequence |
Dno-Mir-1343_3p (predicted) |
| mirBase accession | MIMAT0048048 |
|---|
| Sequence |
38- CUCCUAGGGCCGGCACUCUUGC -60
Get sequence
|
|---|
