MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-1343

Family name MIR-1343 (all species)
Seed UCCUGGG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1343  Cfa-Mir-1343  Cja-Mir-1343  Cpo-Mir-1343  Dno-Mir-1343  Eca-Mir-1343  Hsa-Mir-1343  Ocu-Mir-1343  Pab-Mir-1343 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010048.1: 14669927-14669985 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAUCAGGACAAUGAUGCUGGCUUCAGUGCUGGGGAGUGGCCCCUGGGCGGGCCACUGCUCUGGCCCAUCCUGGGGCCCACACUCUCGCUCCGGGCUCACUCUUCCUCGGCCACUGACA
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Structure
        10           20        30        40         50        
GGAUCAGGACAAUGAUGCU---|    CAGU  U    A    -    U  GC  GCCACU 
                      GGCUU    GC GGGG GUGG CCCC GG  GG      G
                      UCGGG    CG UCUC CACC GGGG CC  CC      C
ACAGUCACCGGCUCCUUCUCAC^    CCU-  C    A    C    U  UA  CGGUCU 
       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-1343_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGGGAGUGGCCCCUGGGCGG -21
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Mature sequence

Laf-Mir-1343_3p (predicted)
mirBase accessionNone
Sequence 
37- AUCCUGGGGCCCACACUCUCGC -59
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