MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1343

Family name MIR-1343 (all species)
Seed UCCUGGG
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1343  Cfa-Mir-1343  Cja-Mir-1343  Cpo-Mir-1343  Dno-Mir-1343  Hsa-Mir-1343  Laf-Mir-1343  Ocu-Mir-1343  Pab-Mir-1343 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009159.1: 1681153-1681211 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAACAGGAUGAUGAUGCUGGCUUCGGUGCUGGGGAGCGGCCCCCGGGCGGGCCUCUGCUCCGGCCCCUCCUGGGGCCCGCACUCUCGCUCCGGGCCCGCUCCACCUUGCCUGCUGACA
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Structure
        10           20        30        40        50         
GGAACAGGAUGAUGAUGCU---|   U   U  U    A    C       C   CCUCUG 
                      GGCU CGG GC GGGG GCGG CCCCGGG GGG      \
                      CCGG GCC CG UCUC CGCC GGGGUCC CCC      C
ACAGUCGUCCGUUCCACCUCGC^   -   U  C    A    C       U   CGGCCU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-1343_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGGGAGCGGCCCCCGGGCGGG -22
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Mature sequence

Eca-Mir-1343_3p
mirBase accessionNone
Sequence 
37- CUCCUGGGGCCCGCACUCUCGC -59
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