MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-1343

Family name MIR-1343 (all species)
Seed UCCUGGG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-1343
Paralogues
Orthologues Bta-Mir-1343  Cfa-Mir-1343  Cja-Mir-1343  Cpo-Mir-1343  Dno-Mir-1343  Eca-Mir-1343  Hsa-Mir-1343  Laf-Mir-1343  Pab-Mir-1343 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chr1: 174235151-174235209 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAACAGGACGAUGAUGCUGGCAUCGGUGCUGGGGAGCGGCCCCCGGGCGGGCCUCUGCUCUGGCCCCUCCUGGGGCCCGCACUCUCGUUCCGGGCCCGCUCCACCUCCAUCUCUGACA
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Structure
        10           20        30        40        50         
GGAACAGGACGAUGAUGCU---|  A    U  U    A    C       C   CCUCUG 
                      GGC UCGG GC GGGG GCGG CCCCGGG GGG      \
                      CCG GGCC UG UCUC CGCC GGGGUCC CCC      C
ACAGUCUCUACCUCCACCUCGC^  -    U  C    A    C       U   CGGUCU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-1343_5p*
mirBase accessionMIMAT0048599
Sequence 
0- UGGGGAGCGGCCCCCGGGCGGG -22
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Mature sequence

Ocu-Mir-1343_3p
mirBase accessionMIMAT0048600
Sequence 
37- CUCCUGGGGCCCGCACUCUCGU -59
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