MirGeneDB ID | Dno-Mir-676 |
Family name |
MIR-676 (all species) |
Seed |
CGUCCUA |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-676
|
Paralogues |
|
Orthologues |
Cfa-Mir-676
Cja-Mir-676
Cpo-Mir-676
Eca-Mir-676
Hsa-Mir-676
Laf-Mir-676
Mml-Mir-676
Mmr-Mir-676
Mmu-Mir-676
Ocu-Mir-676
Pab-Mir-676
Rno-Mir-676
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH573163: 216137-216193 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCAUAUCAGUUCGUCACCUGAACUCAUGACUCUUCAACUUCAGGACUUGCAGAAUUAAUGGAAUGCCGUCCUAAGGUUGUUGAGUUCUGCGUUUCUGGGCAUUUCAUCUCUAUGGA
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCAUAUCAGUUCGUCA- U-| U U UU C UU GAAUU
CC GAAC CA GACUC CAACUU AGGAC GCA A
GG UUUG GU UUGAG GUUGGA UCCUG CGU A
AGGUAUCUCUACUUUACG UC^ C C UU A C- AAGGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dno-Mir-676_5p* |
mirBase accession | MIMAT0048004 |
Sequence |
0- CUCUUCAACUUCAGGACUUGCA -22
Get sequence
|
Mature sequence |
Dno-Mir-676_3p |
mirBase accession | MIMAT0048005 |
Sequence |
36- CCGUCCUAAGGUUGUUGAGUU -57
Get sequence
|