| MirGeneDB ID | Laf-Mir-676 |
|---|---|
| Family name | MIR-676 (all species) |
| Seed | CGUCCUA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-676 Cja-Mir-676 Cpo-Mir-676 Dno-Mir-676 Eca-Mir-676 Hsa-Mir-676 Mml-Mir-676 Mmr-Mir-676 Mmu-Mir-676 Ocu-Mir-676 Pab-Mir-676 Rno-Mir-676 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010051.1: 32868441-32868501 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACUUUAUAUCAGUUCUUCACCUGGAUGCAUGACUCUUCAAUCUCAGGACUUGCAGAAUUAAUGGAAUGCCGUCCUAAGGUUGUUGAGUUCUGCAUUUUGGGGCAUUUCAUCUCUAUGGAGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACUUUAUAUCAGUUCUUCA--| UG U UU C UU AGAAUU CC GAUGCA GACUC CAAUCU AGGAC GC A GG UUACGU UUGAG GUUGGA UCCUG CG A AGAGGUAUCUCUACUUUACGG^ UU C UU A C- UAAGGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-676_5p* |
| mirBase accession | None |
| Sequence |
0- GACUCUUCAAUCUCAGGACUUGC -23
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|
| Mature sequence | Laf-Mir-676_3p |
| mirBase accession | None |
| Sequence |
38- CCGUCCUAAGGUUGUUGAGUUCU -61
Get sequence
|
