| MirGeneDB ID | Pab-Mir-676 |
|---|---|
| Family name | MIR-676 (all species) |
| Seed | CGUCCUA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-676 Cja-Mir-676 Cpo-Mir-676 Dno-Mir-676 Eca-Mir-676 Hsa-Mir-676 Laf-Mir-676 Mml-Mir-676 Mmr-Mir-676 Mmu-Mir-676 Ocu-Mir-676 Rno-Mir-676 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 74854169-74854225 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUCAUAUCAGAUUCUCACCUGAACGCAUGACUCUUCAACCUCAGGACUUGCAGAAUUGAUGGAAUGCCGUCCUAAGGUUGUUGAGUUGUGCGUUUCUGGGCAUUUCAUCUCUAUGGAGet precursor sequence |
| Structure | 10 20 30 40 50 UUCAUAUCAGAUUCUCA- U-| UG UU C UU GAAUU CC GAACGCA ACUC CAACCU AGGAC GCA G GG UUUGCGU UGAG GUUGGA UCCUG CGU A AGGUAUCUCUACUUUACG UC^ GU UU A C- AAGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-676_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CUCUUCAACCUCAGGACUUGCA -22
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|
| Mature sequence | Pab-Mir-676_3p |
| mirBase accession | None |
| Sequence |
36- CCGUCCUAAGGUUGUUGAGUU -57
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|
