MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-676

Family name MIR-676 (all species)
Seed CGUCCUA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-676  Cja-Mir-676  Cpo-Mir-676  Dno-Mir-676  Eca-Mir-676  Hsa-Mir-676  Laf-Mir-676  Mml-Mir-676  Mmr-Mir-676  Mmu-Mir-676  Ocu-Mir-676  Rno-Mir-676 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 74854169-74854225 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAUAUCAGAUUCUCACCUGAACGCAUGACUCUUCAACCUCAGGACUUGCAGAAUUGAUGGAAUGCCGUCCUAAGGUUGUUGAGUUGUGCGUUUCUGGGCAUUUCAUCUCUAUGGA
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Structure
        10         20         30        40        50        
UUCAUAUCAGAUUCUCA-  U-|      UG    UU      C     UU   GAAUU 
                  CC  GAACGCA  ACUC  CAACCU AGGAC  GCA     G
                  GG  UUUGCGU  UGAG  GUUGGA UCCUG  CGU     A
AGGUAUCUCUACUUUACG  UC^      GU    UU      A     C-   AAGGU 
     110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-676_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCUUCAACCUCAGGACUUGCA -22
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Mature sequence

Pab-Mir-676_3p

mirBase accessionNone
Sequence
36- CCGUCCUAAGGUUGUUGAGUU -57
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