MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-676

Family name MIR-676 (all species)
Seed UGUCCUA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-676
Paralogues
Orthologues Cfa-Mir-676  Cja-Mir-676  Cpo-Mir-676  Dno-Mir-676  Eca-Mir-676  Laf-Mir-676  Mml-Mir-676  Mmr-Mir-676  Mmu-Mir-676  Ocu-Mir-676  Pab-Mir-676  Rno-Mir-676 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 70022863-70022919 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAUAUCAGAUUCUCACCUGAACGCAUGACUCUUCAACCUCAGGACUUGCAGAAUUAAUGGAAUGCUGUCCUAAGGUUGUUGAGUUGUGCAUUUCUGGGCAUUUCAUCUCUAUGGG
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Structure
        10         20         30        40        50        
UUCAUAUCAGAUUCUCA-  U   C-|  UG    UU      C     UU   GAAUU 
                  CC GAA  GCA  ACUC  CAACCU AGGAC  GCA     A
                  GG CUU  CGU  UGAG  GUUGGA UCCUG  CGU     A
GGGUAUCUCUACUUUACG  U   UA^  GU    UU      A     U-   AAGGU 
     110       100        90        80        70         60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm.
3' NTU Yes
MotifsNo
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-676_5p*

mirBase accessionMIMAT0018203
Sequence
0- CUCUUCAACCUCAGGACUUGCA -22
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Proposed targets TargetScanVert: hsa-miR-676-5p
TargetMiner: hsa-miR-676-5p
miRDB: MIMAT0018203
Mature sequence

Hsa-Mir-676_3p

mirBase accessionMIMAT0018204
Sequence
36- CUGUCCUAAGGUUGUUGAGUU -57
Get sequence
Proposed targets TargetScanVert: hsa-miR-676-3p
TargetMiner: hsa-miR-676-3p
miRDB: MIMAT0018204