MirGeneDB 3.0
MirGeneDB ID

Ebu-Let-7-P2o10

Family name LET-7 (all species)
Seed GAGGUAG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Let-7-P1e  Ebu-Let-7-P2o6  Ebu-Let-7-P2o7  Ebu-Let-7-P2o8  Ebu-Let-7-P2o9  Ebu-Let-7-P2o11  Ebu-Let-7-P2o12 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009698.1: 6072889-6072967 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAUCCGAAAAUGUUGAGAUUUCCCGGGGUGAGGUAGUAGGUUAUGUAGUUGUGCGGACAGGGAUGUUGUCCAGCAAAAGGAGAUAACUAUACAACCUACUGCCUUUCCCCGGGCUUUCCAACGCCAUCCUGCUGAAA
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Structure
        10         20        30        40        50        60         
UGGAUCCGAAAAUGUUGA-| UUU       U             A       GUGCGGACAGGGAUGU 
                   GA   CCCGGGG GAGGUAGUAGGUU UGUAGUU                U
                   CU   GGGCCCC UUCCGUCAUCCAA AUAUCAA                G
AAAGUCGUCCUACCGCAAC^ UUC       U             C       UAGAGGAAAACGACCU 
       130       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ebu-Let-7-P2o10_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUAUGUAGUU -22
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Star sequence

Ebu-Let-7-P2o10_3p* (predicted)
mirBase accessionNone
Sequence 
58- CUAUACAACCUACUGCCUUUC -79
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