MirGeneDB 2.1

MirGeneDB ID

Ebu-Let-7-P2o7

Family name LET-7 (all species)
Seed GAGGUAG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Let-7-P1e  Ebu-Let-7-P2o6  Ebu-Let-7-P2o8  Ebu-Let-7-P2o9  Ebu-Let-7-P2o10  Ebu-Let-7-P2o11  Ebu-Let-7-P2o12 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)
FYBX02009474.1: 2456633-2456705 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCCUGCUAUGAUUACUGUGCUUGGAAGGUGAGGUAGUAGGUUGUAUUGUUCAAGGCCAAAGAUGUCGACAUUUGAGUUAACGGUACAACCUACUGCCUUCCCCACUACACAGUAGCAGCAAAAAGGACUUU
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Structure
        10           20        30        40        50        60      
CAGCCUGCUAUGAUUAC---|   CU   AA  UG                    CAAGGCCAAAGAU 
                    UGUG  UGG  GG  AGGUAGUAGGUUGUAUUGUU             G
                    ACAC  AUC  CC  UCCGUCAUCCAACAUGGCAA             U
UUUCAGGAAAAACGACGAUG^   --   AC  CU                    UUGAGUUUACAGC 
 130       120       110         100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Ebu-Let-7-P2o7_5p

mirBase accessionNone
Sequence
0- UGAGGUAGUAGGUUGUAUUGUU -22
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Star sequence

Ebu-Let-7-P2o7_3p* (predicted)

mirBase accessionNone
Sequence
52- CGGUACAACCUACUGCCUUCC -73
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