MirGeneDB 3.0
MirGeneDB ID

Ebu-Let-7-P2o12

Family name LET-7 (all species)
Seed GAGGUAG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Let-7-P1e  Ebu-Let-7-P2o6  Ebu-Let-7-P2o7  Ebu-Let-7-P2o8  Ebu-Let-7-P2o9  Ebu-Let-7-P2o10  Ebu-Let-7-P2o11 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02010109.1: 2325129-2325204 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGGGGAGGGAAAGACUGUUCUUGCAGGCUGAGGUAGUAGGUUAUAUUGUUUUAAGGCAGGAAUGUUGCCCAGGCUGGAGAUAACUAUAUAACCUACUGCCUUUCCUGCUGAACAGACAUCUGCAGGAAGACCGC
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Structure
        10           20        30        40        50        60        
GGGGGGGAGGGAAAGAC---|    UU     CU                 U   UUAAGGCAGGAAUGU 
                    UGUUC  GCAGG  GAGGUAGUAGGUUAUAU GUU               \
                    ACAAG  CGUCC  UUCCGUCAUCCAAUAUA CAA               U
CGCCAGAAGGACGUCUACAG^    U-     U-                 U   UAGAGGUCGGACCCG 
    130       120        110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Let-7-P2o12_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUAUAUUGUU -22
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Star sequence

Ebu-Let-7-P2o12_3p*
mirBase accessionNone
Sequence 
55- CUAUAUAACCUACUGCCUUUC -76
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