MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-296

Family name MIR-296 (all species)
Seed GGGUUGG
Species Horse (Equus caballus)
MiRBase ID eca-mir-296
Paralogues
Orthologues Bta-Mir-296  Cfa-Mir-296  Cja-Mir-296  Cpo-Mir-296  Dno-Mir-296  Hsa-Mir-296  Laf-Mir-296  Mml-Mir-296  Mmr-Mir-296  Mmu-Mir-296  Pab-Mir-296  Rno-Mir-296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009169.1: 46180503-46180559 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUGUGGGAGAUGAUGCAGGACUCUUCCGGAGGGCCCCCCCCAAUCCUGUUGUGUUUGAUUCAGAGGGUUGGGUGGAGGCUUUCCUGAAGGCUCUGAGAAGAGCUGCACCCACAGG
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Structure
        10           20        30        40         50       
UUGUGUGGGAGAUGAUG---|  GA U    C        C  -         GUUGUGU 
                    CAG  C CUUC GGAGGGCC CC CCCAAUCCU       U
                    GUC  G GAAG CCUUUCGG GG GGGUUGGGA       U
GGACACCCACGUCGAGAAGA^  UC -    U        A  U         GACUUAG 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-296_5p*
mirBase accessionNone
Sequence 
0- GAGGGCCCCCCCCAAUCCUGU -21
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Mature sequence

Eca-Mir-296_3p
mirBase accessionMIMAT0013107
Sequence 
35- AGGGUUGGGUGGAGGCUUUCCU -57
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