| MirGeneDB ID | Eca-Mir-296 |
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| Family name |
MIR-296 (all species) |
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| Seed |
GGGUUGG |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-296
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| Paralogues |
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| Orthologues |
Bta-Mir-296
Cfa-Mir-296
Cja-Mir-296
Cpo-Mir-296
Dno-Mir-296
Hsa-Mir-296
Laf-Mir-296
Mml-Mir-296
Mmr-Mir-296
Mmu-Mir-296
Pab-Mir-296
Rno-Mir-296
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009169.1: 46180503-46180559 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUGUGUGGGAGAUGAUGCAGGACUCUUCCGGAGGGCCCCCCCCAAUCCUGUUGUGUUUGAUUCAGAGGGUUGGGUGGAGGCUUUCCUGAAGGCUCUGAGAAGAGCUGCACCCACAGG
Get precursor sequence
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| Structure | 10 20 30 40 50
UUGUGUGGGAGAUGAUG---| GA U C C - GUUGUGU
CAG C CUUC GGAGGGCC CC CCCAAUCCU U
GUC G GAAG CCUUUCGG GG GGGUUGGGA U
GGACACCCACGUCGAGAAGA^ UC - U A U GACUUAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Star sequence |
Eca-Mir-296_5p* |
| mirBase accession | None |
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| Sequence |
0- GAGGGCCCCCCCCAAUCCUGU -21
Get sequence
|
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| Mature sequence |
Eca-Mir-296_3p |
| mirBase accession | MIMAT0013107 |
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| Sequence |
35- AGGGUUGGGUGGAGGCUUUCCU -57
Get sequence
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