| MirGeneDB ID | Laf-Mir-296 |
|---|---|
| Family name | MIR-296 (all species) |
| Seed | GGGCCCC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-296 Cfa-Mir-296 Cja-Mir-296 Cpo-Mir-296 Dno-Mir-296 Eca-Mir-296 Hsa-Mir-296 Mml-Mir-296 Mmr-Mir-296 Mmu-Mir-296 Pab-Mir-296 Rno-Mir-296 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010102.1: 9496051-9496106 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGACAAUGACCAAAAGAAGGACCCUUCUGGAGGGCCCCCCCUCAAUCCUGUUGUGCCUGAUUCAGAGGGUUGGGUGGAGGCUUUCCUGAAGGGCUCUGAGGAACACGCUCCCCAGGGet precursor sequence |
| Structure | 10 20 30 40 50 AGACAAUGACCAAAAGA--| GA U C C GUUGUGC AG CCCUUC GGAGGGCC CC CUCAAUCCU C UC GGGAAG CCUUUCGG GG GGGUUGGGA U GGACCCCUCGCACAAGGAG^ UC U A U GACUUAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Laf-Mir-296_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGGCCCCCCCUCAAUCCUGU -21
Get sequence
|
| Star sequence | Laf-Mir-296_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- AGGGUUGGGUGGAGGCUUUCC -56
Get sequence
|
