| MirGeneDB ID | Mmr-Mir-296 |
|---|
| Family name |
MIR-296 (all species) |
|---|
| Seed |
GGGCCCC |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
mmr-mir-296
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-296
Cfa-Mir-296
Cja-Mir-296
Cpo-Mir-296
Dno-Mir-296
Eca-Mir-296
Hsa-Mir-296
Laf-Mir-296
Mml-Mir-296
Mmu-Mir-296
Pab-Mir-296
Rno-Mir-296
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007678.1: 52393946-52394001 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGUGCAAGGUGAAGAGAAAGACCCUUCUAGAGGGCCCCUCCUCAAUCCUGUUGUACUAGAUCCAGAGGGUUGGGCGGAGGCUCUCCUGAAGGCCUCUGCAUAACACCGCGUCAUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUGCAAGGUGAAGAGAA- C- UA -| U U GUUGUAC
AGA CCUUC GAGGGCC CC CC CAAUCCU U
UCU GGAAG CUCUCGG GG GG GUUGGGA A
GGUACUGCGCCACAAUACG CC UC A^ C - GACCUAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut +1 on both arms. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mmr-Mir-296_5p |
| mirBase accession | MIMAT0049225 |
|---|
| Sequence |
0- AGGGCCCCUCCUCAAUCCUGU -21
Get sequence
|
|---|
| Star sequence |
Mmr-Mir-296_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- AGGGUUGGGCGGAGGCUCUCC -56
Get sequence
|
|---|
