MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-193-P2e-v2

Family name MIR-193 (all species)
Seed UAAUGCC
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-193-P1n  Efe-Mir-193-P1o  Efe-Mir-193-P2c-v1  Efe-Mir-193-P2c-v2  Efe-Mir-193-P2d-v1  Efe-Mir-193-P2d-v2  Efe-Mir-193-P2e-v1  Efe-Mir-193-P2f-v1  Efe-Mir-193-P2f-v2 
Orthologues Bge-Mir-193-P2  Cbr-Mir-193-P2-v1  Cbr-Mir-193-P2-v2  Cel-Mir-193-P2-v1  Cel-Mir-193-P2-v2  Cte-Mir-193-P2  Dgr-Mir-193-P2  Dlo-Mir-193-P2  Ebu-Mir-193-P2  Hme-Mir-193-P2  Hru-Mir-193-P2  Lgi-Mir-193-P2  Llo-Mir-193-P2-v1  Llo-Mir-193-P2-v2  Mgi-Mir-193-P2  Pau-Mir-193-P2  Pdu-Mir-193-P2  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Pve-Mir-193-P2  Rph-Mir-193-P2  Sko-Mir-193-P2  Snu-Mir-193-P2  Spu-Mir-193-P2  Sro-Mir-193-P2  Tca-Mir-193-P2  Xbo-Mir-193-P2 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.517063: 880-942 [-]
Precursor
(pre-Mir +30nt flank)
UGGCUCGUAUGAAACUGCUUCCGGUGAGUUCGGGGUUUCGCUGAGCAUUUUCGUCGACAUUUCUGAACCGAUAAUGCCCUUUGAAAUCCUGAACUCAAACUGAAUUCAUCGGACCUGAUGCUG
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Structure
        10        20          30        40        50        60 
UGGCUCGUAUGAAACUGCUUC    --|              CUGA     U   UCGACAU 
                     CGGU  GAGUUCGGGGUUUCG    GCAUU UCG       \
                     GUCA  CUCAAGUCCUAAAGU    CGUAA AGC       U
GUCGUAGUCCAGGCUACUUAA    AA^              UUCC     U   CAAGUCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-193-P2e-v2_5p*
mirBase accessionNone
Sequence 
0- CGGGGUUUCGCUGAGCAUUUUCG -23
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Mature sequence

Efe-Mir-193-P2e-v2_3p
mirBase accessionNone
Sequence 
40- AUAAUGCCCUUUGAAAUCCUGAA -63
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