MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-36-o37

Family name MIR-36 (all species)
Seed CACCGGG
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-36b
Paralogues Egr-Mir-36-o36 
Orthologues Agr-Mir-36  Bge-Mir-36  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) E. granulosus
Node of Origin (family) Protostomia
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000003.1: 597055-597139 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGAGUAAUAGUCAAAAUGUCAAAUCUAGGAGUAAUUUCUAUCCGGUUGGUGUUUUCCAGGGAACACUAGUGUGUCCUCUAUGUCCAAGGCAUCACCGGGUAGUUAUUACGCCUCGGUAUAUGACAACAUGCAUCAAAGUUCCC
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Structure
        10        20          30        40        50        60        70  
GAUGAGUAAUAGUCAAAA     A--|  U   A     UU         U    UUUUCCAGGGAACACUAG 
                  UGUCA   AUC AGG GUAAU  CUAUCCGGU GGUG                  U
                  ACAGU   UGG UCC CAUUA  GAUGGGCCA CUAC                  G
CCCUUGAAACUACGUACA     AUA^  C   G     UU         -    GGAACCUGUAUCUCCUGU 
   140       130       120       110       100         90        80
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-36-o37_5p* (predicted)
mirBase accessionMIMAT0041237
Sequence 
0- GAGUAAUUUCUAUCCGGUUGGUG -23
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Mature sequence

Egr-Mir-36-o37_3p (predicted)
mirBase accessionMIMAT0041238
Sequence 
63- UCACCGGGUAGUUAUUACGCCU -85
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