| MirGeneDB ID | Egr-Mir-36-o37 |
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| Family name |
MIR-36 (all species) |
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| Seed |
CACCGGG |
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| Species |
Hydatid worm (Echinococcus granulosus) |
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| MiRBase ID |
egr-mir-36b
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| Paralogues |
Egr-Mir-36-o36
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| Orthologues |
Agr-Mir-36
Bge-Mir-36
Cte-Mir-36
Dgr-Mir-36
Dlo-Mir-36
Dma-Mir-36
Dpu-Mir-36
Eba-Mir-36
Gsp-Mir-36
Isc-Mir-36
Lhy-Mir-36
Llo-Mir-36
Mgi-Mir-36
Mom-Mir-36
Npo-Mir-36
Ofu-Mir-36
Pau-Mir-36
Pcr-Mir-36
Pdu-Mir-36
Pve-Mir-36
Rph-Mir-36
Snu-Mir-36
Tca-Mir-36
War-Mir-36
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| Node of Origin (locus) |
E. granulosus
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| Node of Origin (family) |
Protostomia
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Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus) |
APAU02000003.1: 597055-597139 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUGAGUAAUAGUCAAAAUGUCAAAUCUAGGAGUAAUUUCUAUCCGGUUGGUGUUUUCCAGGGAACACUAGUGUGUCCUCUAUGUCCAAGGCAUCACCGGGUAGUUAUUACGCCUCGGUAUAUGACAACAUGCAUCAAAGUUCCC
Get precursor sequence
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| Structure | 10 20 30 40 50 60 70
GAUGAGUAAUAGUCAAAA A--| U A UU U UUUUCCAGGGAACACUAG
UGUCA AUC AGG GUAAU CUAUCCGGU GGUG U
ACAGU UGG UCC CAUUA GAUGGGCCA CUAC G
CCCUUGAAACUACGUACA AUA^ C G UU - GGAACCUGUAUCUCCUGU
140 130 120 110 100 90 80 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Er |
Er |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Egr-Mir-36-o37_5p* (predicted) |
| mirBase accession | MIMAT0041237 |
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| Sequence |
0- GAGUAAUUUCUAUCCGGUUGGUG -23
Get sequence
|
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| Mature sequence |
Egr-Mir-36-o37_3p (predicted) |
| mirBase accession | MIMAT0041238 |
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| Sequence |
63- UCACCGGGUAGUUAUUACGCCU -85
Get sequence
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