MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-541

Family name MIR-541 (all species)
Seed AAGGAUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-541  Cja-Mir-541  Cpo-Mir-541  Dno-Mir-541  Eca-Mir-541  Hsa-Mir-541  Laf-Mir-541  Mml-Mir-541  Mmr-Mir-541  Mmu-Mir-541  Ocu-Mir-541  Pab-Mir-541  Rno-Mir-541 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82278837-82278902 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AGGGAUCCGACUCUCACGCCAAAGUCGGGAAAAGGAUUCUGCUGUCGGUCCCACUCCAAAAUUCUCAAAAUGGGUGGUGGGCACAGAAUCCGGACUCUGCUUGUGGCACAUGUCACCAGGCCCUCG
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Structure
        10          20         30        40        50        60    
AGGGAUCCGACUCUCAC--    -|   C   AAAA        C    G UC     CCAAAAUU 
                   GCCA AAGU GGG    GGAUUCUG UGUC G  CCACU        \
                   CGGU UUCG CUC    CCUAAGAC ACGG U  GGUGG        C
GCUCCCGGACCACUGUACA    G^   U   AGG-        -    G --     GUAAAACU 
    120       110       100         90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-541_5p
mirBase accessionNone
Sequence 
0- AAAGGAUUCUGCUGUCGGUCCCACU -25
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Star sequence

Ete-Mir-541_3p*
mirBase accessionNone
Sequence 
44- UGGUGGGCACAGAAUCCGGACU -66
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