MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-541

Family name MIR-541 (all species)
Seed AAGGAUU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-541  Cja-Mir-541  Cpo-Mir-541  Dno-Mir-541  Eca-Mir-541  Ete-Mir-541  Hsa-Mir-541  Mml-Mir-541  Mmr-Mir-541  Mmu-Mir-541  Ocu-Mir-541  Pab-Mir-541  Rno-Mir-541 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75517877-75517942 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUUUCAGAACUCAUGCCAAUGUCAGAAAAAGGAUUCUGCUGUCGGUCCCACUCCAAAUGUCUCAGAAUGGGUGGUGGGCACAGAAUCCGGACUCUGCUUGUGGCACAUGUCAACAGGCCCAUG
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Structure
        10          20         30        40        50        60    
GGGCUUUCAGAACUCAU--    AU-|U    AAAA        C    G UC     CCAAAUGU 
                   GCCA   G CAGA    GGAUUCUG UGUC G  CCACU        \
                   CGGU   C GUCU    CCUAAGAC ACGG U  GGUGG        C
GUACCCGGACAACUGUACA    GUU^-    CAGG        -    G --     GUAAGACU 
    120       110       100         90         80          70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-541_5p (predicted)
mirBase accessionNone
Sequence 
0- AAAGGAUUCUGCUGUCGGUCCCACU -25
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Star sequence

Laf-Mir-541_3p* (predicted)
mirBase accessionNone
Sequence 
44- UGGUGGGCACAGAAUCCGGACU -66
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