MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-2970

Family name MIR-2970 (all species)
Seed ACAGUCA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-2970  Ami-Mir-2970  Cli-Mir-2970  Cpi-Mir-2970  Gga-Mir-2970  Lch-Mir-2970  Mdo-Mir-2970  Mun-Mir-2970  Neu-Mir-2970  Oan-Mir-2970  Pbv-Mir-2970  Sha-Mir-2970  Spt-Mir-2970  Tgu-Mir-2970  Xla-Mir-2970-P1  Xla-Mir-2970-P2  Xtr-Mir-2970 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015173131.1: 774145-774203 [+]
Precursor
(pre-Mir +30nt flank)
GCAUUGUAGGGAUCCUCUCUUGCCGCUGCUGACAGUCAGUAGUUGGUCUGGCGUGAGCAGGAAUUCUCAGAUCACCUUUUGGCUGUGGGUGGUGCAGAGUGCUGUUCUUUUGCCCCAGG
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Structure
        10            20        30        40        50         
GCAUUGUAGGGAUCCUC----|  U  C  UG  G        U  U        CGUGAGC 
                     UCU GC GC  CU ACAGUCAG AG UGGUCUGG       \
                     AGA CG UG  GG UGUCGGUU UC ACUAGACU       A
GGACCCCGUUUUCUUGUCGUG^  -  -  GU  G        U  C        CUUAAGG 
       110       100          90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-2970_5p
mirBase accessionNone
Sequence 
0- GACAGUCAGUAGUUGGUCUGGCG -23
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Star sequence

Gja-Mir-2970_3p*
mirBase accessionNone
Sequence 
36- UCAGAUCACCUUUUGGCUGUGGG -59
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