MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-877

Family name MIR-877 (all species)
Seed UAGAGGA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-877
Paralogues
Orthologues Bta-Mir-877  Cfa-Mir-877  Ete-Mir-877  Mml-Mir-877  Mmu-Mir-877  Rno-Mir-877 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr6: 30584332-30584417 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGACACAGCUGCUGAGAGGCUAGAGAAGGUAGAGGAGAUGGCGCAGGGGACACGGGCAAAGACUUGGGGGUUCCUGGGACCCUCAGACGUGUGUCCUCUUCUCCCUCCUCCCAGGUGUAUGAGGAAUUGCGGGCCACUGGGGCG
Get precursor sequence
Structure
        10        20           30        40        50        60        70    
GAUGACACAGCUGCUGAGAGGCUAGAGAA---| UA      AU  CGC        CGGGCAAAGACUUGGGGGU 
                                GG  GAGGAG  GG   AGGGGACA                   \
                                CC  CUCCUC  CC   UCUCCUGU                   U
GCGGGGUCACCGGGCGUUAAGGAGUAUGUGGA^ --      --  UCU        GUGCAGACUCCCAGGGUCC 
    140       130       120         110         100        90        80
Deep sequencing
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CommentMir-877 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU Yes
MotifsNo
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-877_5p

mirBase accessionMIMAT0004949
Sequence
0- GUAGAGGAGAUGGCGCAGGGGACA -24
Get sequence
Proposed targets microrna.org: MIMAT0004949
TargetScanVert: hsa-miR-877-5p
TargetMiner: hsa-miR-877-5p
miRDB: MIMAT0004949
Star sequence

Hsa-Mir-877_3p*

mirBase accessionMIMAT0004950
Sequence
65- UCCUCUUCUCCCUCCUCCCAG -86
Get sequence
Proposed targets microrna.org: MIMAT0004950
TargetScanVert: hsa-miR-877-3p
TargetMiner: hsa-miR-877-3p
miRDB: MIMAT0004950