| MirGeneDB ID | Mml-Mir-877 |
|---|
| Family name |
MIR-877 (all species) |
|---|
| Seed |
UAGAGGA |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
mml-mir-877
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-877
Cfa-Mir-877
Cja-Mir-877
Ete-Mir-877
Hsa-Mir-877
Laf-Mir-877
Mmr-Mir-877
Mmu-Mir-877
Pab-Mir-877
Rno-Mir-877
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014339.1: 139328498-139328583 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAUGACACAGCUGCUGAGAGGCUAGAGAAGGUAGAGGAGAUGGCGCAGGGGACACGGGCUAAGACUCGGGGGUUCCUGGGACCCUCAGACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUAUGAGGAAUUGCGGGCCACUGGGGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60 70
GAUGACACAGCUGCUGAGAGGCUAGAGAA---| UA AU CGC CGGGCUAAGACUCGGGGGU
GG GAGGAG GG AGGGGACA \
CC CUCCUC CC UCUCCUGU U
ACGGGGUCACCGGGCGUUAAGGAGUAUGUGGA^ -- -- UCU GUACAGACUCCCAGGGUCC
140 130 120 110 100 90 80 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Mir-877 is a conserved mirtron cut at both ends by the spliceosome. |
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Mml-Mir-877_5p |
| mirBase accession | MIMAT0006521 |
|---|
| Sequence |
0- GUAGAGGAGAUGGCGCAGGGGACA -24
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-877-5p
|
|---|
| Star sequence |
Mml-Mir-877_3p* |
| mirBase accession | MIMAT0026911 |
|---|
| Sequence |
65- UCCUCUUCUCCCUCCUCCCAG -86
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-877-3p
|
|---|
