MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-877

Family name MIR-877 (all species)
Seed UAGAGGA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-877  Cfa-Mir-877  Cja-Mir-877  Ete-Mir-877  Hsa-Mir-877  Mml-Mir-877  Mmr-Mir-877  Mmu-Mir-877  Pab-Mir-877  Rno-Mir-877 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010177.1: 1102324-1102409 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGAUGCAGCUGCUGAGAGGCUCGAGAAGGUAGAGGAGAUGGCGCAGGGGACACAGGCUAUGACAUGGGGGCUCCUGGGGCCCUUGAACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUAUGAGGAGUUGCGGGCCACAGGGGCG
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Structure
        10        20           30        40        50        60        70    
GAUGAUGCAGCUGCUGAGAGG    AGAA---| UA      AU  CGC        CAGGCUAUGACAUGGGGGC 
                     CUCG       GG  GAGGAG  GG   AGGGGACA                   \
                     GAGU       CC  CUCCUC  CC   UCUCCUGU                   U
GCGGGGACACCGGGCGUUGAG    AUGUGGA^ --      --  UCU        GUACAAGUUCCCGGGGUCC 
    140       130       120         110         100        90        80
Deep sequencing
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CommentMir-877 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-877_5p
mirBase accessionNone
Sequence 
0- GUAGAGGAGAUGGCGCAGGGGACA -24
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Star sequence

Laf-Mir-877_3p*
mirBase accessionNone
Sequence 
65- UCCUCUUCUCCCUCCUCCCAG -86
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