| MirGeneDB ID | Mmr-Mir-877 |
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| Family name |
MIR-877 (all species) |
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| Seed |
UAGAGGA |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-877
Cfa-Mir-877
Cja-Mir-877
Ete-Mir-877
Hsa-Mir-877
Laf-Mir-877
Mml-Mir-877
Mmu-Mir-877
Pab-Mir-877
Rno-Mir-877
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007666.1: 682813-682896 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUGACACAGCUGCCGAGAGGCUGGAGAAGGUAGAGGAGAUGGCGCAGGGGACACAGGUAAGACUUGGGGUUCUUGGGGCCCUUGAACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUACGAGGAAUUGCGGGCUACCGGGGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60 70
GAUGACACAGCUGCCGAGAGG---------| A A U A UGGCGC CAGGUAAGACUUGGGGUU
CUGG GA GG AG GGAGA AGGGGACA \
GACC CU CC UC CCUCU UCUCCUGU C
ACGGGGCCAUCGGGCGUUAAGGAGCAUGUG^ - - - - ------ GUACAAGUUCCCGGGGUU
140 130 120 110 100 90 80 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Mir-877 is a conserved mirtron cut at both ends by the spliceosome. |
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| 3' NTU |
Yes
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Mmr-Mir-877_5p |
| mirBase accession | None |
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| Sequence |
0- GUAGAGGAGAUGGCGCAGGGGACA -24
Get sequence
|
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| Star sequence |
Mmr-Mir-877_3p* |
| mirBase accession | None |
|---|
| Sequence |
61- UGUCCUCUUCUCCCUCCUCCCAG -84
Get sequence
|
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