MirGeneDB ID | Mal-Mir-132-P2b |
Family name |
MIR-132 (all species) |
Seed |
CCUUGGC |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
Mal-Mir-132-P1a
Mal-Mir-132-P1b
Mal-Mir-132-P2a
|
Orthologues |
Aca-Mir-132-P2
Ami-Mir-132-P2
Bta-Mir-132-P2
Cfa-Mir-132-P2
Cja-Mir-132-P2
Cmi-Mir-132-P2
Cpi-Mir-132-P2
Cpo-Mir-132-P2
Dno-Mir-132-P2
Dre-Mir-132-P2b
Eca-Mir-132-P2
Gga-Mir-132-P2
Gja-Mir-132-P2
Gmo-Mir-132-P2b
Hsa-Mir-132-P2
Laf-Mir-132-P2
Lch-Mir-132-P2
Loc-Mir-132-P2
Mdo-Mir-132-P2
Mml-Mir-132-P2
Mmr-Mir-132-P2
Mmu-Mir-132-P2
Mun-Mir-132-P2
Neu-Mir-132-P2
Oan-Mir-132-P2
Ocu-Mir-132-P2
Pab-Mir-132-P2
Pbv-Mir-132-P2
Pma-Mir-132-o2
Rno-Mir-132-P2
Sha-Mir-132-P2
Spt-Mir-132-P2
Tgu-Mir-132-P2
Tni-Mir-132-P2b
Xtr-Mir-132-P2
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884887.1: 549978-550045 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUAUCCACCUAAUUUGGCCAGAGCAUCAGCACCUUGGCUUUAGACUGCUUACUGCUUAUACAGUGUCACAGCACAGUAACAGUCUACAGUCAUGGCUACUGAAGCCUGGCAAUAAACUGAACACUAUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUAUCCACCUAAUUUGG--| A A CA- U U C GCUUAUACAG
CCAG GC UCAG CC UGGCU UAGACUG UUACU \
GGUC CG AGUC GG ACUGA AUCUGAC AAUGA U
GUAUCACAAGUCAAAUAAC^ - A AUC U C - CACGACACUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Mal-Mir-132-P2b_5p |
mirBase accession | None |
Sequence |
0- ACCUUGGCUUUAGACUGCUUACU -23
Get sequence
|
Co-mature sequence |
Mal-Mir-132-P2b_3p |
mirBase accession | None |
Sequence |
46- UAACAGUCUACAGUCAUGGCUA -68
Get sequence
|