Mir-132-P1a

MirGeneDB ID

Mal-Mir-132-P1a

Family name

MIR-132 (all species)

Seed

AACAGUC

Species

Asian swamp eel (Monopterus albus)

MiRBase ID

Paralogues

Mal-Mir-132-P1b Mal-Mir-132-P2a Mal-Mir-132-P2b

Orthologues

Aca-Mir-132-P1 Ami-Mir-132-P1 Bta-Mir-132-P1 Cfa-Mir-132-P1 Cja-Mir-132-P1 Cmi-Mir-132-P1 Cpi-Mir-132-P1 Cpo-Mir-132-P1 Dno-Mir-132-P1 Dre-Mir-132-P1a Eca-Mir-132-P1 Ete-Mir-132-P1 Gga-Mir-132-P1 Gja-Mir-132-P1 Gmo-Mir-132-P1a Hsa-Mir-132-P1 Laf-Mir-132-P1 Lch-Mir-132-P1 Loc-Mir-132-P1 Mdo-Mir-132-P1 Mml-Mir-132-P1 Mmr-Mir-132-P1 Mmu-Mir-132-P1 Mun-Mir-132-P1 Neu-Mir-132-P1 Oan-Mir-132-P1 Ocu-Mir-132-P1 Pab-Mir-132-P1 Pbv-Mir-132-P1 Pma-Mir-132-o1 Rno-Mir-132-P1 Sha-Mir-132-P1 Spt-Mir-132-P1 Sto-Mir-132-P1 Tgu-Mir-132-P1 Tni-Mir-132-P1a Xtr-Mir-132-P1

Node of Origin (locus)

Clupeocephala

Node of Origin (family)

Vertebrata

Genome context
(GCA_001952655.1_M_albus_1.0_genomic)

KV884840.1: 364190-364252 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAUCAUAUUACUCCCCCUGUCUCCAUGGUGACCGUGGCAUUAGAUUGUUACUGUAGCAACAGCACCACAGGUAACAGUCUACAGCCAUGGUCGCUAAGGGGCAAAACGCACAUCUGAACCUGA

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Structure

        10           20        30        40        50        60 
AAUCAUAUUACUCCCCC---|   U  A             AU            GUAGCAAC 
                    UGUC CC UGGUGACCGUGGC  UAGAUUGUUACU        \
                    ACGG GG AUCGCUGGUACCG  AUCUGACAAUGG        A
AGUCCAAGUCUACACGCAAA^   -  A             AC            ACACCACG 
 120       110       100         90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Fe	Fe	In	Ma	Ma

Star sequence

Mal-Mir-132-P1a_5p*

mirBase accession

None

Sequence

0- ACCGUGGCAUUAGAUUGUUACU -22

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Mature sequence

Mal-Mir-132-P1a_3p

mirBase accession

None

Sequence

41- UAACAGUCUACAGCCAUGGUCG -63

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