MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-132-P1a

Family name MIR-132 (all species)
Seed AACAGUC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-132-P1b  Mal-Mir-132-P2a  Mal-Mir-132-P2b 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Xtr-Mir-132-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884840.1: 364190-364252 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUCAUAUUACUCCCCCUGUCUCCAUGGUGACCGUGGCAUUAGAUUGUUACUGUAGCAACAGCACCACAGGUAACAGUCUACAGCCAUGGUCGCUAAGGGGCAAAACGCACAUCUGAACCUGA
Get precursor sequence
Structure
        10           20        30        40        50        60 
AAUCAUAUUACUCCCCC---|   U  A             AU            GUAGCAAC 
                    UGUC CC UGGUGACCGUGGC  UAGAUUGUUACU        \
                    ACGG GG AUCGCUGGUACCG  AUCUGACAAUGG        A
AGUCCAAGUCUACACGCAAA^   -  A             AC            ACACCACG 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-132-P1a_5p*

mirBase accessionNone
Sequence
0- ACCGUGGCAUUAGAUUGUUACU -22
Get sequence
Mature sequence

Mal-Mir-132-P1a_3p

mirBase accessionNone
Sequence
41- UAACAGUCUACAGCCAUGGUCG -63
Get sequence