MirGeneDB 3.0

MirGeneDB ID

Xtr-Mir-132-P1

Family name MIR-132 (all species)
Seed AACAGUC
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-132
Paralogues Xtr-Mir-132-P2 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cja-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Dre-Mir-132-P1b  Ebu-Mir-132-P1e  Ebu-Mir-132-P1f  Eca-Mir-132-P1  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Laf-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mal-Mir-132-P1b  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmr-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Neu-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pab-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Tni-Mir-132-P1b  Xla-Mir-132-P1c  Xla-Mir-132-P1d 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)
chr2: 27663375-27663433 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P1)
Mir-132-P2 chr2: 27657646-27657714 [+] UCSC Ensembl
Mir-132-P1 chr2: 27663375-27663433 [+] UCSC Ensembl
Mir-2184 chr2: 27689436-27689495 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUUUUUAUACUACCACUGUCUCCAGGGCAACCGUGGCUUUAGAUUGUUACUGUAGUUCUGCAUUGGUAACAGUCUACAGCCAUGGUCGCUCGGGCAAGAUGCAGUCAGCGUGGUUGAA
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Structure
        10        20          30        40        50         
AAUUUUUAUACUACCACU    --| A    A         U            GUAGUU 
                  GUCU  CC GGGC ACCGUGGCU UAGAUUGUUACU      \
                  UAGA  GG CUCG UGGUACCGA AUCUGACAAUGG      C
AAGUUGGUGCGACUGACG    AC^ G    C         C            UUACGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
An Br Em Em He Ve
Star sequence

Xtr-Mir-132-P1_5p*

mirBase accessionNone
Sequence
0- ACCGUGGCUUUAGAUUGUUACU -22
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Mature sequence

Xtr-Mir-132-P1_3p

mirBase accessionMIMAT0003594
Sequence
37- UAACAGUCUACAGCCAUGGUCG -59
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Proposed targets TargetScanVert: xtr-miR-132