MirGeneDB 2.1

MirGeneDB ID

Tgu-Mir-132-P1

Family name MIR-132 (all species)
Seed CCGUGGC
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues Tgu-Mir-132-P2 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Dre-Mir-132-P1b  Ebu-Mir-132-P1e  Ebu-Mir-132-P1f  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mal-Mir-132-P1b  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tni-Mir-132-P1a  Tni-Mir-132-P1b  Xla-Mir-132-P1c  Xla-Mir-132-P1d  Xtr-Mir-132-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)
19: 4632357-4632415 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCCCCCCCACUCCGACGCCGCCCGGGCGACCGUGGCUUUAGAUUGUUACUGUGCCGCUGGGGGGGUAACAGUCUACAGCCAUGGUCGCCGGGACAGGCGGAAUCGCAGCGCGGGCAG
Get precursor sequence
Structure
        10         20         30        40        50         
GGUCCCCCCCACUCCGA-    GC-| G             U            GUGCCG 
                  CGCC   CC GGCGACCGUGGCU UAGAUUGUUACU      \
                  GCGG   GG CCGCUGGUACCGA AUCUGACAAUGG      C
GACGGGCGCGACGCUAAG    ACA^ G             C            GGGGGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-132-P1_5p

mirBase accessionNone
Sequence
0- ACCGUGGCUUUAGAUUGUUACU -22
Get sequence
Star sequence

Tgu-Mir-132-P1_3p*

mirBase accessionNone
Sequence
37- UAACAGUCUACAGCCAUGGUCG -59
Get sequence