MirGeneDB 2.1

MirGeneDB ID

Dre-Mir-132-P1a

Family name MIR-132 (all species)
Seed AACAGUC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-132-1
Paralogues Dre-Mir-132-P1b  Dre-Mir-132-P2a  Dre-Mir-132-P2b 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Xtr-Mir-132-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)
chr15: 25897727-25897789 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P1a)
Mir-132-P2a chr15: 25897460-25897528 [+] UCSC Ensembl
Mir-132-P1a chr15: 25897727-25897789 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCCAACCCUCCUGCUGUCUCCAUGGCGACCGUGGCAUUAGAUUGUUACUGUAGGAACAGAAUUUUUGGUAACAGUCUACAGCCAUGGUCGCUAGUGGGCAGAAACACCAGCAUCUACCCU
Get precursor sequence
Structure
        10           20        30        40        50        60 
ACUGCCAACCCUCCUGC---|    CCA             AU            GUAGGAAC 
                    UGUCU   UGGCGACCGUGGC  UAGAUUGUUACU        \
                    ACGGG   AUCGCUGGUACCG  AUCUGACAAUGG        A
UCCCAUCUACGACCACAAAG^    UG-             AC            UUUUUAAG 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-132-P1a_5p*

mirBase accessionMIMAT0003403
Sequence
0- ACCGUGGCAUUAGAUUGUUACU -22
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Mature sequence

Dre-Mir-132-P1a_3p

mirBase accessionMIMAT0001829
Sequence
41- UAACAGUCUACAGCCAUGGUCG -63
Get sequence
Proposed targets TargetScanFish: dre-miR-132