MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-132-P2a

Family name MIR-132 (all species)
Seed CCUUGGC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-212
Paralogues Dre-Mir-132-P1a  Dre-Mir-132-P1b  Dre-Mir-132-P2b 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cja-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Eca-Mir-132-P2  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2a  Hsa-Mir-132-P2  Laf-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmr-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Neu-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pab-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Xtr-Mir-132-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)
chr15: 25897460-25897528 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P2a)
Mir-132-P2a chr15: 25897460-25897528 [+] UCSC Ensembl
Mir-132-P1a chr15: 25897727-25897789 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGAAUGCUUGAAAAGUCAGUGCAUCAAUACCUUGGCUCUAGACUGCUUACUGCUAAAUGUGUCUGAAAGUACAGUAACAGUCUACAGUCAUGGCUACUGACGUCUGGCAACCUUCCACAGAGGAUUC
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Structure
        10           20        30         40        50        60    
ACUGAAUGCUUGAAAAG---|   U  A   A  -  U     C       C     GCUAAAUGUG 
                    UCAG GC UCA UA CC UGGCU UAGACUG UUACU          \
                    GGUC UG AGU AU GG ACUGA AUCUGAC AAUGA          U
CUUAGGAGACACCUUCCAAC^   -  C   C  C  U     C       -     CAUGAAAGUC 
       120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-132-P2a_5p

mirBase accessionNone
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
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Co-mature sequence

Dre-Mir-132-P2a_3p

mirBase accessionMIMAT0003049
Sequence
46- UAACAGUCUACAGUCAUGGCUAC -69
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Proposed targets TargetScanFish: dre-miR-212