MirGeneDB 3.0

MirGeneDB ID

Gja-Mir-132-P2

Family name MIR-132 (all species)
Seed CCUUGGC
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-132-P1 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cja-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2a  Dre-Mir-132-P2b  Eca-Mir-132-P2  Gga-Mir-132-P2  Gmo-Mir-132-P2a  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Laf-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmr-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Neu-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pab-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Tni-Mir-132-P2b  Xla-Mir-132-P2c  Xla-Mir-132-P2d  Xtr-Mir-132-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)
NW_015173122.1: 1272663-1272729 [-]
Precursor
(pre-Mir +30nt flank)
CGAGGAGAAGACUCUGGUCAGGGCGUCGGGACCUUGGCUCUAGACUGCUUACUGCCAAACACUGCGGGAGAAACAGUAACAGUCUACAGUCAUGGCUACUGAAGUCUGGCCGCAACAACCGUCCCUC
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Structure
        10        20        30         40        50        60    
CGAGGAGAAGACUCUGGUCA    G    GA-| U     C       C     GCCAAACACU 
                    GGGC UCGG   CC UGGCU UAGACUG UUACU          \
                    UCUG AGUC   GG ACUGA AUCUGAC AAUGA          G
CUCCCUGCCAACAACGCCGG    A    AUC^ U     C       -     CAAAGAGGGC 
     120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Gja-Mir-132-P2_5p

mirBase accessionNone
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
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Co-mature sequence

Gja-Mir-132-P2_3p

mirBase accessionNone
Sequence
46- UAACAGUCUACAGUCAUGGCU -67
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