| MirGeneDB ID | Pab-Mir-132-P2 |
|---|---|
| Family name | MIR-132 (all species) |
| Seed | AACAGUC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-132-P1 |
| Orthologues | Aca-Mir-132-P2 Ami-Mir-132-P2 Bta-Mir-132-P2 Cfa-Mir-132-P2 Cja-Mir-132-P2 Cmi-Mir-132-P2 Cpi-Mir-132-P2 Cpo-Mir-132-P2 Dno-Mir-132-P2 Dre-Mir-132-P2a Dre-Mir-132-P2b Eca-Mir-132-P2 Gga-Mir-132-P2 Gja-Mir-132-P2 Gmo-Mir-132-P2a Gmo-Mir-132-P2b Hsa-Mir-132-P2 Laf-Mir-132-P2 Lch-Mir-132-P2 Loc-Mir-132-P2 Mal-Mir-132-P2a Mal-Mir-132-P2b Mdo-Mir-132-P2 Mml-Mir-132-P2 Mmr-Mir-132-P2 Mmu-Mir-132-P2 Mun-Mir-132-P2 Neu-Mir-132-P2 Oan-Mir-132-P2 Ocu-Mir-132-P2 Pbv-Mir-132-P2 Pma-Mir-132-o2 Rno-Mir-132-P2 Sha-Mir-132-P2 Spt-Mir-132-P2 Tgu-Mir-132-P2 Tni-Mir-132-P2a Tni-Mir-132-P2b Xla-Mir-132-P2c Xla-Mir-132-P2d Xtr-Mir-132-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054698.2: 1852675-1852736 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGGGGCACCCCGCCCGGACAGCGCGCCGGCACCUUGGCUCUAGACUGCUUACUGCCCGGGCCGCCCUCAGUAACAGUCUCCAGUCACGGCCACCGACGCCUGGCCCCGCCCCAGGACCGCGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CGGGGCACCCCGCCCGGA--| C C CA- U CU C GCCCGGG CAG GCG CGG CC UGGCU AGACUG UUACU \ GUC CGC GCC GG ACUGA UCUGAC AAUGA C GGCGCCAGGACCCCGCCCCG^ - A ACC C CC - CUCCCGC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-132-P2_5p* |
| mirBase accession | None |
| Sequence |
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
|
| Mature sequence | Pab-Mir-132-P2_3p |
| mirBase accession | None |
| Sequence |
40- UAACAGUCUCCAGUCACGGCCA -62
Get sequence
|
