MirGeneDB 3.0

MirGeneDB ID

Tni-Mir-132-P2b

Family name MIR-132 (all species)
Seed CCUUGGC
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-132-P1a  Tni-Mir-132-P1b  Tni-Mir-132-P2a 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cja-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2b  Eca-Mir-132-P2  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Laf-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmr-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Neu-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pab-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Xtr-Mir-132-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)
7: 7924699-7924767 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGUCCUCCUACACUGGCCAGAGCAUCAGCACCUUGGCUUUAGACUGCUUACUGUUUAUACAGUAUCACAGUACAGUAACAGUCUACAGUCAUGGCUACCGACGCCUGGUAAUACAUCAACCACCAAGC
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Structure
        10           20           30        40        50        60    
CCGUCCUCCUACACUGG---    A  A  ---|  ACCU     U       C     GUUUAUACAG 
                    CCAG GC UC   AGC    UGGCU UAGACUG UUACU          \
                    GGUC CG AG   UCG    ACUGA AUCUGAC AAUGA          U
CGAACCACCAACUACAUAAU    -  C  CCA^  GU--     C       -     CAUGACACUA 
       120       110        100          90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sp Sp Sp To
Mature sequence

Tni-Mir-132-P2b_5p

mirBase accessionNone
Sequence
0- ACCUUGGCUUUAGACUGCUUACU -23
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Co-mature sequence

Tni-Mir-132-P2b_3p

mirBase accessionNone
Sequence
46- UAACAGUCUACAGUCAUGGCUAC -69
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