MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-132-P1b

Family name MIR-132 (all species)
Seed AACAGUC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-132-2
Paralogues Dre-Mir-132-P1a  Dre-Mir-132-P2a  Dre-Mir-132-P2b 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cja-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Eca-Mir-132-P1  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Laf-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1b  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmr-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Neu-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pab-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1b  Xtr-Mir-132-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)
chr10: 35645043-35645103 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P1b)
Mir-132-P2b chr10: 35644719-35644787 [+] UCSC Ensembl
Mir-132-P1b chr10: 35645043-35645103 [+] UCSC Ensembl
Mir-2184-P1a chr10: 35654276-35654332 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAUCCCUUCCUCUGCUGUCUCCAUGCUGACCGUGGCUUUAGAUUGUUACUGUAGCGUUGGCACGUGGUAACAGUCUACAGCCAUGGUCGCCAAGGGGCAGGUGUUACAGCGACUACUGG
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Structure
        10           20        30        40        50          
CUCAUCCCUUCCUCUGC---|   U  A  C           U            GUAGCGU 
                    UGUC CC UG UGACCGUGGCU UAGAUUGUUACU       \
                    ACGG GG AC GCUGGUACCGA AUCUGACAAUGG       U
GGUCAUCAGCGACAUUGUGG^   -  A  C           C            UGCACGG 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-132-P1b_5p*

mirBase accessionNone
Sequence
0- ACCGUGGCUUUAGAUUGUUACU -22
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Mature sequence

Dre-Mir-132-P1b_3p

mirBase accessionMIMAT0001829
Sequence
39- UAACAGUCUACAGCCAUGGUCG -61
Get sequence
Proposed targets TargetScanFish: dre-miR-132