Mir-137-P3b-v2

MirGeneDB ID

Mal-Mir-137-P3b-v2

Family name

MIR-137 (all species)

Seed

AUUGCUU

Species

Asian swamp eel (Monopterus albus)

MiRBase ID

Paralogues

Mal-Mir-137-P1b-v1 Mal-Mir-137-P1b-v2 Mal-Mir-137-P3a-v1 Mal-Mir-137-P3a-v2 Mal-Mir-137-P3b-v1

Orthologues

Aca-Mir-137-P3-v1 Aca-Mir-137-P3-v2 Aga-Mir-137 Agr-Mir-137 Ami-Mir-137-P3-v1 Ami-Mir-137-P3-v2 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bko-Mir-137 Bpl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cli-Mir-137-P3 Cpi-Mir-137-P3-v1 Cpi-Mir-137-P3-v2 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gga-Mir-137-P3-v1 Gga-Mir-137-P3-v2 Gja-Mir-137-P3 Gmo-Mir-137-P3b-v1 Gmo-Mir-137-P3b-v2 Gpa-Mir-137 Hme-Mir-137 Hru-Mir-137 Isc-Mir-137 Lan-Mir-137 Lch-Mir-137-P3 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Loc-Mir-137-P3-v1 Loc-Mir-137-P3-v2 Mdo-Mir-137-P3-v1 Mdo-Mir-137-P3-v2 Mgi-Mir-137 Mom-Mir-137 Mun-Mir-137-P3 Neu-Mir-137-P3 Oan-Mir-137-P3-v1 Oan-Mir-137-P3-v2 Obi-Mir-137 Ofu-Mir-137 Pau-Mir-137 Pbv-Mir-137-P3-v1 Pbv-Mir-137-P3-v2 Pca-Mir-137 Pdu-Mir-137 Pma-Mir-137-o3 Pve-Mir-137 Rph-Mir-137 Sha-Mir-137-P3 Sko-Mir-137 Snu-Mir-137 Spu-Mir-137 Tni-Mir-137-P3b Tur-Mir-137 War-Mir-137 Xbo-Mir-137

Node of Origin (locus)

Clupeocephala

Node of Origin (family)

Bilateria

Genome context
(GCA_001952655.1_M_albus_1.0_genomic)

KV884720.1: 635728-635787 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GGAGGUGGGCCUCUUUGCUCCGGUCUCGACCACGGGUAUUCUUGGGUUGAUAAUACAGAUGUGGAUGUUAUUGCUUGAGAAUACGCGUAGUCGAGUGGAAGCUUUAUCAUCUACUGUGGA

Get precursor sequence

Structure

        10           20        30        40          50         
GGAGGUGGGCCUCUUUGC---|   GU      C   G       UG   --     AUACAG 
                     UCCG  CUCGAC ACG GUAUUCU  GGU  UGAUA      \
                     AGGU  GAGCUG UGC CAUAAGA  UCG  AUUGU      A
AGGUGUCAUCUACUAUUUCGA^   --      A   G       GU   UU     AGGUGU 
.       110       100          90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Fe	Fe	In	Ma	Ma

Star sequence

Mal-Mir-137-P3b-v2_5p*

mirBase accession

None

Sequence

0- CACGGGUAUUCUUGGGUUGAUAA -23

Get sequence

Mature sequence

Mal-Mir-137-P3b-v2_3p

mirBase accession

None

Sequence

38- UAUUGCUUGAGAAUACGCGUAG -60

Get sequence