MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-137-P3-v1

Family name MIR-137 (all species)
Seed UAUUGCU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-137b
Paralogues Ami-Mir-137-P1-v1  Ami-Mir-137-P1-v2  Ami-Mir-137-P3-v2 
Orthologues Aca-Mir-137-P3-v1  Aca-Mir-137-P3-v2  Aga-Mir-137  Agr-Mir-137  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cli-Mir-137-P3  Cpi-Mir-137-P3-v1  Cpi-Mir-137-P3-v2  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gga-Mir-137-P3-v1  Gga-Mir-137-P3-v2  Gja-Mir-137-P3  Gmo-Mir-137-P3a-v1  Gmo-Mir-137-P3a-v2  Gmo-Mir-137-P3b-v1  Gmo-Mir-137-P3b-v2  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lch-Mir-137-P3  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P3-v1  Loc-Mir-137-P3-v2  Mal-Mir-137-P3a-v1  Mal-Mir-137-P3a-v2  Mal-Mir-137-P3b-v1  Mal-Mir-137-P3b-v2  Mdo-Mir-137-P3-v1  Mdo-Mir-137-P3-v2  Mgi-Mir-137  Mom-Mir-137  Mun-Mir-137-P3  Neu-Mir-137-P3  Oan-Mir-137-P3-v1  Oan-Mir-137-P3-v2  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pbv-Mir-137-P3-v1  Pbv-Mir-137-P3-v2  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o3  Pve-Mir-137  Rph-Mir-137  Sha-Mir-137-P3  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tni-Mir-137-P3b  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017708461.1: 34909-34967 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-137-P3-v1)		 Mir-137-P3-v2 NW_017708461.1: 34908-34968 [-] UCSC
Mir-137-P3-v1 NW_017708461.1: 34909-34967 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GAGGCUCGCGGAGCCCAGCUCCCUUCGAUGACGGGUAUUCUUGGGUAGAUAAUACGGCUGGCGUUGUUAUUGCUUGAGAAUACGCGUAGUCGAGGGGAGAGACACUCGCCUCCCACCCG
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Structure
        10          20        30        40        50         
GAGGCUCGCGGAGCCCAG--|          G   G       UG     A     CGGC 
                    CUCCCUUCGAU ACG GUAUUCU  GGUAG UAAUA    U
                    GAGGGGAGCUG UGC CAUAAGA  UCGUU AUUGU    G
GCCCACCCUCCGCUCACAGA^          A   G       GU     -     UGCG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ami-Mir-137-P3-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACGGGUAUUCUUGGGUAGAUAAUA -24
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Mature sequence

Ami-Mir-137-P3-v1_3p
mirBase accessionMIMAT0038154
Sequence 
36- UUAUUGCUUGAGAAUACGCGUAG -59
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