Mir-137-P3-v2

MirGeneDB ID

Gga-Mir-137-P3-v2

Family name

MIR-137 (all species)

Seed

AUUGCUG

Species

Chicken (Gallus gallus)

MiRBase ID

Paralogues

Gga-Mir-137-P1-v1 Gga-Mir-137-P1-v2 Gga-Mir-137-P3-v1

Orthologues

Aca-Mir-137-P3-v1 Aca-Mir-137-P3-v2 Aga-Mir-137 Agr-Mir-137 Ami-Mir-137-P3-v1 Ami-Mir-137-P3-v2 Asu-Mir-137 Ava-Mir-137 Bfl-Mir-137 Bko-Mir-137 Bpl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cli-Mir-137-P3 Cpi-Mir-137-P3-v1 Cpi-Mir-137-P3-v2 Cte-Mir-137 Dan-Mir-137 Dgr-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Eba-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gja-Mir-137-P3 Gmo-Mir-137-P3a-v1 Gmo-Mir-137-P3a-v2 Gmo-Mir-137-P3b-v1 Gmo-Mir-137-P3b-v2 Gpa-Mir-137 Hme-Mir-137 Hru-Mir-137 Isc-Mir-137 Lan-Mir-137 Lch-Mir-137-P3 Lgi-Mir-137 Lhy-Mir-137 Llo-Mir-137 Loc-Mir-137-P3-v1 Loc-Mir-137-P3-v2 Mal-Mir-137-P3a-v1 Mal-Mir-137-P3a-v2 Mal-Mir-137-P3b-v1 Mal-Mir-137-P3b-v2 Mdo-Mir-137-P3-v1 Mdo-Mir-137-P3-v2 Mgi-Mir-137 Mom-Mir-137 Mun-Mir-137-P3 Neu-Mir-137-P3 Oan-Mir-137-P3-v1 Oan-Mir-137-P3-v2 Obi-Mir-137 Ofu-Mir-137 Pau-Mir-137 Pbv-Mir-137-P3-v1 Pbv-Mir-137-P3-v2 Pca-Mir-137 Pdu-Mir-137 Pma-Mir-137-o3 Pve-Mir-137 Rph-Mir-137 Sha-Mir-137-P3 Sko-Mir-137 Snu-Mir-137 Spu-Mir-137 Tni-Mir-137-P3b Tur-Mir-137 War-Mir-137 Xbo-Mir-137

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(Gallus_gallus.GRCg6a)

18: 11367831-11367890 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACCCCGGAUGCCCCCCCCGCGCCCCGCGGUGACGGGUAUUCUCGGGCGGAUAACACGGCCGCGCUGUUAUUGCUGGAGAAUACGCGUAGCCGAGGGGACGCCCCGAGCCGGCCUCCUCGU

Get precursor sequence

Structure

        10         20         30        40        50          
ACCCCGGAUGCCCCCCCC-   -|   G    G   G        G    G     ACGGC 
                   GCG CCCC CGGU ACG GUAUUCUC GGCG AUAAC     \
                   CGC GGGG GCCG UGC CAUAAGAG UCGU UAUUG     C
UGCUCCUCCGGCCGAGCCC   A^   A    A   G        G    -     UCGCG 
.       110       100        90        80         70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Ad	Ad	Ad	Br	Br	Ce	Ce	Ce	Ce	Gg	He	He	Hy	Hy	Ki	Ki	Li	Li	Lu	Lu	Ov	Pr	Pr	Sc	Sc	Sp	Sp	Te

Star sequence

Gga-Mir-137-P3-v2_5p* (predicted)

mirBase accession

None

Sequence

0- GACGGGUAUUCUCGGGCGGAUAAC -24

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Mature sequence

Gga-Mir-137-P3-v2_3p

mirBase accession

None

Sequence

37- UAUUGCUGGAGAAUACGCGUAGC -60

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