Mir-137-P3a-v2

MirGeneDB ID

Mal-Mir-137-P3a-v2

Family name

MIR-137 (all species)

Seed

AUUGCUU

Species

Asian swamp eel (Monopterus albus)

MiRBase ID

Paralogues

Mal-Mir-137-P1b-v1 Mal-Mir-137-P1b-v2 Mal-Mir-137-P3a-v1 Mal-Mir-137-P3b-v1 Mal-Mir-137-P3b-v2

Orthologues

Aca-Mir-137-P3-v1 Aca-Mir-137-P3-v2 Ami-Mir-137-P3-v1 Ami-Mir-137-P3-v2 Asu-Mir-137 Bfl-Mir-137 Cbr-Mir-137 Cel-Mir-137 Cgi-Mir-137 Cli-Mir-137-P3 Cpi-Mir-137-P3-v1 Cpi-Mir-137-P3-v2 Cte-Mir-137 Dan-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dpu-Mir-137 Dsi-Mir-137 Dya-Mir-137 Ebu-Mir-137 Esc-Mir-137 Gga-Mir-137-P3-v1 Gga-Mir-137-P3-v2 Gja-Mir-137-P3 Gmo-Mir-137-P3a-v1 Gmo-Mir-137-P3a-v2 Hme-Mir-137 Isc-Mir-137 Lan-Mir-137 Lch-Mir-137-P3 Lgi-Mir-137 Loc-Mir-137-P3-v1 Loc-Mir-137-P3-v2 Mdo-Mir-137-P3-v1 Mdo-Mir-137-P3-v2 Mun-Mir-137-P3 Oan-Mir-137-P3-v1 Oan-Mir-137-P3-v2 Obi-Mir-137 Pbv-Mir-137-P3-v1 Pbv-Mir-137-P3-v2 Pma-Mir-137-o3 Sha-Mir-137-P3 Sko-Mir-137 Spu-Mir-137 Xbo-Mir-137

Node of Origin (locus)

Clupeocephala

Node of Origin (family)

Bilateria

Genome context
(GCA_001952655.1_M_albus_1.0_genomic)

KV884980.1: 354664-354724 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GGUGGCGUGACCGCUUGCUCCCGUCUCGACCACGGGUAUUCUUGGGUUGAUAAUACAGAUGUCGAUGUUAUUGCUUGAGAAUACGCGUAGCUGAGCGGAAGCCAUCGUCAGCGGCGGCACA

Get precursor sequence

Structure

        10           20        30        40        50        60
GGUGGCGUGACCGCUUG---| C   U    ACC   G       UG   U      ACAGA 
                    CU CCG CUCG   ACG GUAUUCU  GGU GAUAAU     U
                    GA GGC GAGU   UGC CAUAAGA  UCG UUAUUG     G
ACACGGCGGCGACUGCUACC^ A   -    CGA   G       GU   -      UAGCU 
 .       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Fe	Fe	In	Ma	Ma

Star sequence

Mal-Mir-137-P3a-v2_5p*

mirBase accession

None

Sequence

0- CACGGGUAUUCUUGGGUUGAUAAU -24

Get sequence

Mature sequence

Mal-Mir-137-P3a-v2_3p

mirBase accession

None

Sequence

38- UAUUGCUUGAGAAUACGCGUAGC -61

Get sequence