Mir-193-P2b

MirGeneDB ID

Neu-Mir-193-P2b

Family name

MIR-193 (all species)

Seed

AAUGCCC

Species

Tammar Wallaby (Notamacropus eugenii)

MiRBase ID

Paralogues

Neu-Mir-193-P1b Neu-Mir-193-P2a

Orthologues

Aca-Mir-193-P2b Ami-Mir-193-P2b Bge-Mir-193-P2 Bta-Mir-193-P2b Cbr-Mir-193-P2-v1 Cbr-Mir-193-P2-v2 Cel-Mir-193-P2-v1 Cel-Mir-193-P2-v2 Cfa-Mir-193-P2b Cja-Mir-193-P2b Cli-Mir-193-P2b Cmi-Mir-193-P2b Cpi-Mir-193-P2b Cpo-Mir-193-P2b Cte-Mir-193-P2 Dgr-Mir-193-P2 Dlo-Mir-193-P2 Dno-Mir-193-P2b Dre-Mir-193-P2b1 Dre-Mir-193-P2b2 Ebu-Mir-193-P2 Eca-Mir-193-P2b Ete-Mir-193-P2b Gga-Mir-193-P2b Gja-Mir-193-P2b Gmo-Mir-193-P2b2 Hme-Mir-193-P2 Hru-Mir-193-P2 Hsa-Mir-193-P2b Laf-Mir-193-P2b Lch-Mir-193-P2b Lgi-Mir-193-P2 Llo-Mir-193-P2-v1 Llo-Mir-193-P2-v2 Loc-Mir-193-P2b Mal-Mir-193-P2b2 Mgi-Mir-193-P2 Mml-Mir-193-P2b Mmr-Mir-193-P2b Mmu-Mir-193-P2b Mun-Mir-193-P2b Oan-Mir-193-P2b Ocu-Mir-193-P2b Pab-Mir-193-P2b Pau-Mir-193-P2 Pbv-Mir-193-P2b Pdu-Mir-193-P2 Pfl-Mir-193-P2 Pma-Mir-193-P2 Pmi-Mir-193-P2 Pve-Mir-193-P2 Rno-Mir-193-P2b Rph-Mir-193-P2 Sha-Mir-193-P2b Sko-Mir-193-P2 Snu-Mir-193-P2 Spt-Mir-193-P2b Spu-Mir-193-P2 Sro-Mir-193-P2 Sto-Mir-193-P2b Tca-Mir-193-P2 Tgu-Mir-193-P2b Tni-Mir-193-P2b2 Xbo-Mir-193-P2

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Bilateria

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051814.1: 312204646-312204708 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGGAGAGCCCUCAAAGGCAGCAAGAAAAAGGAGGGACUUUCAGGGGCAGCUGUGUUUUAUUAACUCAGUCAUAAUGCCCCUAAAAAUCCUUAUUGUUCUUGCAAUGUUCAUCUGGCAUCUCCA

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Structure

        10          20        30        40        50        60  
UGGAGAGCCCUCAAAGGCA--|      AAAGG     C   C       GC    UUUUAUU 
                     GCAAGAA     AGGGA UUU AGGGGCA  UGUG       \
                     CGUUCUU     UUCCU AAA UCCCCGU  AUAC       A
ACCUCUACGGUCUACUUGUAA^      GUUA-     A   A       A-    UGACUCA 
 120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Star sequence

Neu-Mir-193-P2b_5p*

mirBase accession

None

Sequence

0- GAGGGACUUUCAGGGGCAGCUGUG -24

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Mature sequence

Neu-Mir-193-P2b_3p

mirBase accession

None

Sequence

41- UAAUGCCCCUAAAAAUCCUUAU -63

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