MirGeneDB 3.0

19 microRNA genes with seed CAGGAAC

						Sort by genome coordinates							Motifs
MirGeneDB ID ▼	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	3' NTU	UG	UGUG	CNNC
Tni-Mir-196-P3a	tni-mir-196b	MIR-196	AGGUAGU	MIMAT0003034	None	Un_random	5576389	5576449	-	Clupeocephala	Olfactores	No			1
Rno-Mir-873-v2	rno-mir-873	MIR-873	CAGGAAC	MIMAT0005339	MIMAT0017318	chr5	52481086	52481142	-	Mammalia	Mammalia	No			1
Pab-Mir-873-v2	None	MIR-873	CAGGAAC	None	None	CM054692.2	29140914	29140970	+	Mammalia	Mammalia	No			1
Ocu-Mir-873-v2	ocu-mir-873	MIR-873	CAGGAAC	MIMAT0048573	MIMAT0048574	chr1	24466641	24466697	+	Mammalia	Mammalia	No			1
Oan-Mir-873-v2	oan-mir-873	MIR-873	CAGGAAC	MIMAT0007272	MIMAT0007273	NC_041753.1	38127937	38127993	-	Mammalia	Mammalia	No			1
Neu-Mir-873-v2	None	MIR-873	CAGGAAC	None	None	CM051813.1	119542426	119542482	-	Mammalia	Mammalia	No			1
Mmu-Mir-873-v2	mmu-mir-873a	MIR-873	CAGGAAC	MIMAT0004936	MIMAT0017279	chr4	36668520	36668576	-	Mammalia	Mammalia	No			1
Mml-Mir-873-v2	mml-mir-873	MIR-873	CAGGAAC	MIMAT0024311	MIMAT0027106	CM014350.1	54879500	54879556	+	Mammalia	Mammalia	No			1
Mdo-Mir-873-v2	mdo-mir-873	MIR-873	CAGGAAC	MIMAT0028664	MIMAT0028665	6	46253224	46253280	-	Mammalia	Mammalia	No			1
Hsa-Mir-873-v2	hsa-mir-873	MIR-873	CAGGAAC	MIMAT0004953	MIMAT0022717	chr9	28888889	28888945	-	Mammalia	Mammalia	No			1
Ete-Mir-873-v2	None	MIR-873	CAGGAAC	None	None	JH980356	5691865	5691921	-	Mammalia	Mammalia	No			1
Eca-Mir-873-v2	eca-mir-873	MIR-873	CAGGAAC	MIMAT0013120	None	CM009170.1	46232419	46232475	-	Mammalia	Mammalia	No			1
Dno-Mir-873-v2	dno-mir-873	MIR-873	CAGGAAC	MIMAT0048016	MIMAT0048017	JH581283	597024	597080	+	Mammalia	Mammalia	No			1
Cpo-Mir-873-v2	cpo-mir-873	MIR-873	CAGGAAC	MIMAT0047391	MIMAT0047392	scaffold_2	7394200	7394256	-	Mammalia	Mammalia	No			1
Cja-Mir-873-v2	None	MIR-873	CAGGAAC	None	None	CM021915.1	133148384	133148440	-	Mammalia	Mammalia	Unknown			1
Cfa-Mir-873-v2	None	MIR-873	CAGGAAC	None	None	chr11	46838188	46838244	-	Mammalia	Mammalia	No			1
Bta-Mir-873-v2	bta-mir-873	MIR-873	CAGGAAC	MIMAT0009377	None	NC_037335.1	15215609	15215665	+	Mammalia	Mammalia	No			1
Mml-Mir-7179	mml-mir-7179	MIR-7179	UACGUGA	MIMAT0028302	MIMAT0028303	CM014336.1	145484658	145484716	+	M. mulatta	M. mulatta	No
Mmu-Mir-7220	mmu-mir-7220	MIR-7220	CAGGAAC	MIMAT0028408	MIMAT0028409	chr18	60953873	60953932	+	M. musculus	M. musculus	No			1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all