MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-873-v2

Family name MIR-873 (all species)
Seed CAGGAAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-873
Paralogues Hsa-Mir-873-v1 
Orthologues Bta-Mir-873-v2  Cfa-Mir-873-v2  Cja-Mir-873-v2  Cpo-Mir-873-v2  Dno-Mir-873-v2  Eca-Mir-873-v2  Ete-Mir-873-v2  Laf-Mir-873  Mdo-Mir-873-v2  Mml-Mir-873-v2  Mmr-Mir-873  Mmu-Mir-873-v2  Neu-Mir-873-v2  Oan-Mir-873-v2  Ocu-Mir-873-v2  Pab-Mir-873-v2  Rno-Mir-873-v2 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(hg38)		 chr9: 28888889-28888945 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-873-v2)		 Mir-876-v2 chr9: 28863634-28863696 [-] UCSC Ensembl
Mir-876-v1 chr9: 28863636-28863694 [-] UCSC Ensembl
Mir-873-v1 chr9: 28888888-28888946 [-] UCSC Ensembl
Mir-873-v2 chr9: 28888889-28888945 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCUGCUUAGAAUAAGUUUGUGUGCAUUUGCAGGAACUUGUGAGUCUCCUAUUGAAAAUGAACAGGAGACUGAUGAGUUCCCGGGAACACCCACAAAUCUUCCUACUCAUUUCUAC
Get precursor sequence
Structure
        10          20        30        40        50        
UUCCUGCUUAGAAUAAG--|     UGCAUUUGCA      UG G        AUUGAA 
                   UUUGUG          GGAACU  U AGUCUCCU      \
                   AAACAC          CCUUGA  A UCAGAGGA      A
CAUCUUUACUCAUCCUUCU^     CCACAAGGGC      GU G        CAAGUA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-873-v2_5p
mirBase accessionMIMAT0004953
Sequence 
0- GCAGGAACUUGUGAGUCUCCUA -22
Get sequence
Proposed targets microrna.org: MIMAT0004953
TargetScanVert: hsa-miR-873-5p.1
TargetMiner: hsa-miR-873-5p
miRDB: MIMAT0004953
Star sequence

Hsa-Mir-873-v2_3p*
mirBase accessionMIMAT0022717
Sequence 
35- GGAGACUGAUGAGUUCCCGGGA -57
Get sequence
Proposed targets TargetScanVert: hsa-miR-873-3p
TargetMiner: hsa-miR-873-3p
miRDB: MIMAT0022717