MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-876
Paralogues Hsa-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cfa-Mir-876-v2  Cja-Mir-876-v2  Cpo-Mir-876-v2  Dno-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Laf-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr9: 28863634-28863696 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-876-v2)
Mir-876-v2 chr9: 28863634-28863696 [-] UCSC Ensembl
Mir-876-v1 chr9: 28863636-28863694 [-] UCSC Ensembl
Mir-873-v1 chr9: 28888888-28888946 [-] UCSC Ensembl
Mir-873-v2 chr9: 28888889-28888945 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAGGCUUUACACAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCU
Get precursor sequence
Structure
        10          20        30        40        50        60 
ACCAGGCUUUACACAAA--|       UG         U               UAUCUAAG 
                   CUGUGAAG  CUGUGGAUU CUUUGUGAAUCACCA        \
                   GACACUUC  GAUACUUAA GAAACAUUUGGUGGU        C
UCUAGUUGACGUCUUCGUG^       GU         U               GGUGUAAU 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-876-v2_5p

mirBase accessionMIMAT0004924
Sequence
0- UGGAUUUCUUUGUGAAUCACCA -22
Get sequence
Proposed targets microrna.org: MIMAT0004924
TargetScanVert: hsa-miR-876-5p
TargetMiner: hsa-miR-876-5p
miRDB: MIMAT0004924
Star sequence

Hsa-Mir-876-v2_3p*

mirBase accessionMIMAT0004925
Sequence
41- GUGGUUUACAAAGUAAUUCAUA -63
Get sequence
Proposed targets microrna.org: MIMAT0004925
TargetScanVert: hsa-miR-876-3p
TargetMiner: hsa-miR-876-3p
miRDB: MIMAT0004925