| MirGeneDB ID | Mml-Mir-876-v2 |
|---|---|
| Family name | MIR-876 (all species) |
| Seed | GGAUUUC |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-876 |
| Paralogues | Mml-Mir-876-v1 |
| Orthologues | Bta-Mir-876-v2 Cfa-Mir-876-v2 Cja-Mir-876-v2 Cpo-Mir-876-v2 Dno-Mir-876-v2 Eca-Mir-876-v2 Ete-Mir-876 Hsa-Mir-876-v2 Laf-Mir-876-v2 Mmr-Mir-876 Ocu-Mir-876-v2 Pab-Mir-876-v2 Rno-Mir-876-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014350.1: 54900830-54900892 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-876-v2) |
Mir-873-v1
CM014350.1: 54879499-54879557 [+]
UCSC
Ensembl
Mir-873-v2 CM014350.1: 54879500-54879556 [+] UCSC Ensembl Mir-876-v2 CM014350.1: 54900830-54900892 [+] UCSC Ensembl Mir-876-v1 CM014350.1: 54900832-54900890 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACCAGGCUUUACACAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACCAGGCUUUACACAAA--| UG U UAUCUAAG CUGUGAAG CUGUGGAUU CUUUGUGAAUCACCA \ GACACUUC GAUACUUAA GAAACAUUUGGUGGU C UCUAGUUGACGUCUUCGUG^ GU U GGUGUAAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Mml-Mir-876-v2_5p |
| mirBase accession | MIMAT0006519 |
| Sequence |
0- UGGAUUUCUUUGUGAAUCACCA -22
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-876-5p |
| Star sequence | Mml-Mir-876-v2_3p* (predicted) |
| mirBase accession | MIMAT0006520 |
| Sequence |
41- GUGGUUUACAAAGUAAUUCAUA -63
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-876-3p |
