MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cfa-Mir-876-v2  Cpo-Mir-876-v2  Dno-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Hsa-Mir-876-v2  Laf-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021915.1: 133122225-133122287 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAGGCUUUACACAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCU
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Structure
        10          20        30        40        50        60 
ACCAGGCUUUACACAAA--|       UG         U               UAUCUAAG 
                   CUGUGAAG  CUGUGGAUU CUUUGUGAAUCACCA        \
                   GACACUUC  GAUACUUAA GAAACAUUUGGUGGU        C
UCUAGUUGACGUCUUCGUG^       GU         U               GGUGUAAU 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-876-v2_5p (predicted)
mirBase accessionNone
Sequence 
0- UGGAUUUCUUUGUGAAUCACCA -22
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Star sequence

Cja-Mir-876-v2_3p* (predicted)
mirBase accessionNone
Sequence 
41- GUGGUUUACAAAGUAAUUCAUA -63
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