MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species Guinea pig (Cavia porcellus)
MiRBase ID
Paralogues Cpo-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cfa-Mir-876-v2  Cja-Mir-876-v2  Dno-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Hsa-Mir-876-v2  Laf-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_2: 7371449-7371511 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-876-v2)		 Mir-873-v1 scaffold_2: 7394199-7394257 [-] UCSC
Mir-873-v2 scaffold_2: 7394200-7394256 [-] UCSC
Precursor
(pre-Mir +30nt flank)
ACCAAGCUUUAUACAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUGAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAAUUGAUCU
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Structure
        10          20        30        40        50        60 
ACCAAGCUUUAUACAAA--|       UG         U               UAUCUGAG 
                   CUGUGAAG  CUGUGGAUU CUUUGUGAAUCACCA        \
                   GACACUUC  GAUACUUAA GAAACAUUUGGUGGU        C
UCUAGUUAACGUCUUCGUG^       GU         U               GGUGUAAU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-876-v2_5p
mirBase accessionNone
Sequence 
0- UGGAUUUCUUUGUGAAUCACCA -22
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Star sequence

Cpo-Mir-876-v2_3p* (predicted)
mirBase accessionNone
Sequence 
41- GUGGUUUACAAAGUAAUUCAUA -63
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