MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cfa-Mir-876-v2  Cja-Mir-876-v2  Cpo-Mir-876-v2  Dno-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Hsa-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010033.1: 70593767-70593829 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAAGCUUUAAACAAACUGUGAAAUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAACUAAUAUGGUGGGGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCU
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Structure
        10          20        30        40        50        60 
ACCAAGCUUUAAACAAA--|      AU          U           A   UAUCUAAA 
                   CUGUGAA  GCUGUGGAUU CUUUGUGAAUC CCA        \
                   GACACUU  UGAUACUUAA GAAACAUUUGG GGU        C
UCUAGUUGACGUCUUCGUG^      CG          U           G   GGUAUAAU 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-876-v2_5p (predicted)
mirBase accessionNone
Sequence 
0- UGGAUUUCUUUGUGAAUCACCA -22
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Star sequence

Laf-Mir-876-v2_3p* (predicted)
mirBase accessionNone
Sequence 
40- GGGGGUUUACAAAGUAAUUCAUA -63
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