| MirGeneDB ID | Laf-Mir-876-v2 |
|---|---|
| Family name | MIR-876 (all species) |
| Seed | GGAUUUC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-876-v1 |
| Orthologues | Bta-Mir-876-v2 Cfa-Mir-876-v2 Cja-Mir-876-v2 Cpo-Mir-876-v2 Dno-Mir-876-v2 Eca-Mir-876-v2 Ete-Mir-876 Hsa-Mir-876-v2 Mml-Mir-876-v2 Mmr-Mir-876 Ocu-Mir-876-v2 Pab-Mir-876-v2 Rno-Mir-876-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010033.1: 70593767-70593829 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACCAAGCUUUAAACAAACUGUGAAAUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAACUAAUAUGGUGGGGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACCAAGCUUUAAACAAA--| AU U A UAUCUAAA CUGUGAA GCUGUGGAUU CUUUGUGAAUC CCA \ GACACUU UGAUACUUAA GAAACAUUUGG GGU C UCUAGUUGACGUCUUCGUG^ CG U G GGUAUAAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-876-v2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGGAUUUCUUUGUGAAUCACCA -22
Get sequence
|
| Star sequence | Laf-Mir-876-v2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- GGGGGUUUACAAAGUAAUUCAUA -63
Get sequence
|
