MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-876-v1

Family name MIR-876 (all species)
Seed GGGGGUU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-876-v2 
Orthologues Bta-Mir-876-v1  Cfa-Mir-876-v1  Cja-Mir-876-v1  Cpo-Mir-876-v1  Dno-Mir-876-v1  Eca-Mir-876-v1  Ete-Mir-876  Hsa-Mir-876-v1  Mml-Mir-876-v1  Mmr-Mir-876  Ocu-Mir-876-v1  Pab-Mir-876-v1  Rno-Mir-876-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010033.1: 70593769-70593827 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGCUUUAAACAAACUGUGAAAUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAACUAAUAUGGUGGGGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAU
Get precursor sequence
Structure
        10          20        30        40        50         
CAAGCUUUAAACAAACU--|    AU          U           A    AUCUAAA 
                   GUGAA  GCUGUGGAUU CUUUGUGAAUC CCAU       \
                   CACUU  UGAUACUUAA GAAACAUUUGG GGUG       C
UAGUUGACGUCUUCGUGGA^    CG          U           G    GUAUAAU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-876-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAUUUCUUUGUGAAUCACCAUA -22
Get sequence
Mature sequence

Laf-Mir-876-v1_3p (predicted)
mirBase accessionNone
Sequence 
37- UGGGGGUUUACAAAGUAAUUCA -59
Get sequence