| MirGeneDB ID | Pab-Mir-876-v1 |
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| Family name |
MIR-876 (all species) |
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| Seed |
GGUGGUU |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
Pab-Mir-876-v2
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| Orthologues |
Bta-Mir-876-v1
Cfa-Mir-876-v1
Cja-Mir-876-v1
Cpo-Mir-876-v1
Dno-Mir-876-v1
Eca-Mir-876-v1
Ete-Mir-876
Hsa-Mir-876-v1
Laf-Mir-876-v1
Mml-Mir-876-v1
Mmr-Mir-876
Ocu-Mir-876-v1
Rno-Mir-876-v1
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054692.2: 29163132-29163190 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGGCUUUACACAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAGGCUUUACACAAACU--| UG U AUCUAAG
GUGAAG CUGUGGAUU CUUUGUGAAUCACCAU \
CACUUC GAUACUUAA GAAACAUUUGGUGGUG C
UAGUUGACGUCUUCGUGGA^ GU U GUGUAAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Pab-Mir-876-v1_5p* |
| mirBase accession | None |
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| Sequence |
0- GAUUUCUUUGUGAAUCACCAUA -22
Get sequence
|
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| Mature sequence |
Pab-Mir-876-v1_3p |
| mirBase accession | None |
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| Sequence |
37- UGGUGGUUUACAAAGUAAUUCA -59
Get sequence
|
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