| MirGeneDB ID | Dno-Mir-876-v1 |
|---|---|
| Family name | MIR-876 (all species) |
| Seed | GGUGGUU |
| Species | Nine-banded armadillo (Dasypus novemcinctus) |
| MiRBase ID | |
| Paralogues | Dno-Mir-876-v2 |
| Orthologues | Bta-Mir-876-v1 Cfa-Mir-876-v1 Cja-Mir-876-v1 Cpo-Mir-876-v1 Eca-Mir-876-v1 Ete-Mir-876 Hsa-Mir-876-v1 Laf-Mir-876-v1 Mml-Mir-876-v1 Mmr-Mir-876 Ocu-Mir-876-v1 Pab-Mir-876-v1 Rno-Mir-876-v1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (dasNov3) |
JH581283: 622706-622764 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-876-v1) |
Mir-873-v1
JH581283: 597023-597081 [+]
UCSC
Ensembl
Mir-873-v2 JH581283: 597024-597080 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAAGUCUUAAAGAAACUGUUAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAACUAGUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUACUUCUGCAGUUGAUGet precursor sequence |
| Structure | 10 20 30 40 50 CAAGUCUUAAAGAAACU--| U UG U AUCUAAA GU AAG CUGUGGAUU CUUUGUGAAUCACCAU \ CA UUC GAUACUUAA GAAACAUUUGGUGGUG C UAGUUGACGUCUUCAUGGA^ C GU U GUGUGAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Dno-Mir-876-v1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GAUUUCUUUGUGAAUCACCAUA -22
Get sequence
|
| Mature sequence | Dno-Mir-876-v1_3p |
| mirBase accession | None |
| Sequence |
37- UGGUGGUUUACAAAGUAAUUCA -59
Get sequence
|
