MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues Dno-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cfa-Mir-876-v2  Cja-Mir-876-v2  Cpo-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Hsa-Mir-876-v2  Laf-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH581283: 622704-622766 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-876-v2)
Mir-873-v1 JH581283: 597023-597081 [+] UCSC Ensembl
Mir-873-v2 JH581283: 597024-597080 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCAAGUCUUAAAGAAACUGUUAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAACUAGUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUACUUCUGCAGUUGAUCU
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Structure
        10          20        30        40        50        60 
UCCAAGUCUUAAAGAAA--|   U   UG         U               UAUCUAAA 
                   CUGU AAG  CUGUGGAUU CUUUGUGAAUCACCA        \
                   GACA UUC  GAUACUUAA GAAACAUUUGGUGGU        C
UCUAGUUGACGUCUUCAUG^   C   GU         U               GGUGUGAU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-876-v2_5p

mirBase accessionNone
Sequence
0- UGGAUUUCUUUGUGAAUCACCA -22
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Star sequence

Dno-Mir-876-v2_3p* (predicted)

mirBase accessionNone
Sequence
41- GUGGUUUACAAAGUAAUUCAUA -63
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